I wrote a script that opens Medical Image Labeler and loads some images in it to be annotated by the user. When the command medicalImageLabeler(gTruth) is executed, the app opens and a popup window (see figure) asks the user to select the path of the new session folder and to enter the name of the session folder. I want the predefined path of the session folder to be the same of the current working directory.

For example: if the current working directory is C:UsersMynameDocuments, the predefined folder for the new Medical Image Labeler’s session has to be C:UsersMynameDocuments.
On my Windows PC I was able to obtain this behavior by setting the working directory with cd, pointing to the desired path (e.g. cd(userFolder) where userFolder = "C:UsersMynameDocuments").
The solution above doesn’t seem to work in the PCs connected to my department server, which run Linux. In this case the predefined folder for savings in the Medical Image Labeler app is always the MATLAB folder (e.g. C:UsersMynameDocumentsMATLAB or similar in the linux environment, I don’t rememeber exactly the folder path) even if run the code in a different folder and even if I change the working directory with cd before opening Medical Image Labeler.
Could it be a problem due to the different operating system? Is there a way to fix it?I wrote a script that opens Medical Image Labeler and loads some images in it to be annotated by the user. When the command medicalImageLabeler(gTruth) is executed, the app opens and a popup window (see figure) asks the user to select the path of the new session folder and to enter the name of the session folder. I want the predefined path of the session folder to be the same of the current working directory.

For example: if the current working directory is C:UsersMynameDocuments, the predefined folder for the new Medical Image Labeler’s session has to be C:UsersMynameDocuments.
On my Windows PC I was able to obtain this behavior by setting the working directory with cd, pointing to the desired path (e.g. cd(userFolder) where userFolder = "C:UsersMynameDocuments").
The solution above doesn’t seem to work in the PCs connected to my department server, which run Linux. In this case the predefined folder for savings in the Medical Image Labeler app is always the MATLAB folder (e.g. C:UsersMynameDocumentsMATLAB or similar in the linux environment, I don’t rememeber exactly the folder path) even if run the code in a different folder and even if I change the working directory with cd before opening Medical Image Labeler.
Could it be a problem due to the different operating system? Is there a way to fix it? I wrote a script that opens Medical Image Labeler and loads some images in it to be annotated by the user. When the command medicalImageLabeler(gTruth) is executed, the app opens and a popup window (see figure) asks the user to select the path of the new session folder and to enter the name of the session folder. I want the predefined path of the session folder to be the same of the current working directory.

For example: if the current working directory is C:UsersMynameDocuments, the predefined folder for the new Medical Image Labeler’s session has to be C:UsersMynameDocuments.
On my Windows PC I was able to obtain this behavior by setting the working directory with cd, pointing to the desired path (e.g. cd(userFolder) where userFolder = "C:UsersMynameDocuments").
The solution above doesn’t seem to work in the PCs connected to my department server, which run Linux. In this case the predefined folder for savings in the Medical Image Labeler app is always the MATLAB folder (e.g. C:UsersMynameDocumentsMATLAB or similar in the linux environment, I don’t rememeber exactly the folder path) even if run the code in a different folder and even if I change the working directory with cd before opening Medical Image Labeler.
Could it be a problem due to the different operating system? Is there a way to fix it? medical image labeler, linux, windows, cd, path, working directory MATLAB Answers — New Questions

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