Niftiwrite throws error even when just saving the image
Hi, I was playing around with segementing/skull stripping and wanted to save the new image the the MRI header using niftiwrite. This gave me an error so I then tried to load the image and save it with the following code:
T1 = niftiread(fullfile(fpath, [‘mri/’, participant, ‘_T1.nii’]));
T1_info = niftiinfo(fullfile(fpath, [‘mri/’, participant, ‘_T1.nii’]));
niftiwrite(T1, ‘test.nii’, T1_info);
Which then gave me the following error:
Error using niftiwrite>parseInputs (line 175)
The value of ‘Info’ is invalid. Volume size does not match header size specified.
Error in niftiwrite (line 89)
[V, path, filename, params] = parseInputs(V, filename, varargin{:});
I’m not allowed to share the MRI but any ideas why this is happening? Thanks!Hi, I was playing around with segementing/skull stripping and wanted to save the new image the the MRI header using niftiwrite. This gave me an error so I then tried to load the image and save it with the following code:
T1 = niftiread(fullfile(fpath, [‘mri/’, participant, ‘_T1.nii’]));
T1_info = niftiinfo(fullfile(fpath, [‘mri/’, participant, ‘_T1.nii’]));
niftiwrite(T1, ‘test.nii’, T1_info);
Which then gave me the following error:
Error using niftiwrite>parseInputs (line 175)
The value of ‘Info’ is invalid. Volume size does not match header size specified.
Error in niftiwrite (line 89)
[V, path, filename, params] = parseInputs(V, filename, varargin{:});
I’m not allowed to share the MRI but any ideas why this is happening? Thanks! Hi, I was playing around with segementing/skull stripping and wanted to save the new image the the MRI header using niftiwrite. This gave me an error so I then tried to load the image and save it with the following code:
T1 = niftiread(fullfile(fpath, [‘mri/’, participant, ‘_T1.nii’]));
T1_info = niftiinfo(fullfile(fpath, [‘mri/’, participant, ‘_T1.nii’]));
niftiwrite(T1, ‘test.nii’, T1_info);
Which then gave me the following error:
Error using niftiwrite>parseInputs (line 175)
The value of ‘Info’ is invalid. Volume size does not match header size specified.
Error in niftiwrite (line 89)
[V, path, filename, params] = parseInputs(V, filename, varargin{:});
I’m not allowed to share the MRI but any ideas why this is happening? Thanks! image processing, matlab, matlab function MATLAB Answers — New Questions